Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 213
Gene Symbol: ALB
ALB
0.100 Biomarker disease BEFREE Δ albumin is a better prognostic marker for an eventful postoperative course after laparoscopic surgery in patients with Crohn's disease in comparison to albumin alone. 30422980 2018
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.050 AlteredExpression disease BEFREE [<sup>18</sup>F]FDG PET/MR enterography for the assessment of inflammatory activity in Crohn's disease: comparison of different MRI and PET parameters. 29455313 2018
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.020 Biomarker disease BEFREE With the use of a mouse model of TNF-driven Crohn's-like ileitis (TNF(Δ) (ARE)), we examined the role of CCR7 in the control of intestinal T cell and DC retention/egress during experimental CD. 25637591 2015
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.400 Biomarker disease BEFREE With the use of a mouse model of TNF-driven Crohn's-like ileitis (TNF(Δ) (ARE)), we examined the role of CCR7 in the control of intestinal T cell and DC retention/egress during experimental CD. 25637591 2015
Entrez Id: 55054
Gene Symbol: ATG16L1
ATG16L1
0.700 Biomarker disease BEFREE With the recent completion of the human genome project, whole genome association studies (WGAS) have now become possible and have identified additional genes (IL23R, IRGM, PTGER4, ATG16L1) for Crohn's disease and ulcerative colitis, that have subsequently been replicated. 18473763 2008
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
0.700 GeneticVariation disease BEFREE With respect to all the analysed IRGM variants, no association was found to either CD or UC. 22065112 2012
Entrez Id: 55054
Gene Symbol: ATG16L1
ATG16L1
0.700 Biomarker disease LHGDN With respect to ATG16L1, the G allele of SNP rs2241880 has been shown in multiple association studies to confer strong risk for CD, although its association with UC remains more debatable. 18366306 2008
Entrez Id: 55054
Gene Symbol: ATG16L1
ATG16L1
0.700 GeneticVariation disease BEFREE With respect to ATG16L1, the G allele of SNP rs2241880 has been shown in multiple association studies to confer strong risk for CD, although its association with UC remains more debatable. 18366306 2008
Entrez Id: 1666
Gene Symbol: DECR1
DECR1
0.050 GeneticVariation disease BEFREE Whole-exome sequence analysis was performed using DNA from 46 of the children with CD to examine associations with NADPH gene mutations; RNA sequence analyses were performed using blood cells from 46 children with CD to test for variations in neutrophil gene expression associated with ROS production. 29454792 2018
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
1.000 GeneticVariation disease LHGDN While the three risk alleles influence susceptibility to Crohn's disease in Australia, we show that these alleles do not fully explain the linkage evidence and suggest that there are very likely additional IBD1 susceptibility alleles yet to be described in Australian CD at the NOD2 locus. 12556233 2003
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
1.000 GeneticVariation disease BEFREE While the three risk alleles influence susceptibility to Crohn's disease in Australia, we show that these alleles do not fully explain the linkage evidence and suggest that there are very likely additional IBD1 susceptibility alleles yet to be described in Australian CD at the NOD2 locus. 12556233 2003
Entrez Id: 130589
Gene Symbol: GALM
GALM
0.100 GeneticVariation disease BEFREE While the three risk alleles influence susceptibility to Crohn's disease in Australia, we show that these alleles do not fully explain the linkage evidence and suggest that there are very likely additional IBD1 susceptibility alleles yet to be described in Australian CD at the NOD2 locus. 12556233 2003
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.100 GeneticVariation disease BEFREE While the IL-4-1098 T allele was present at higher frequencies in patients with UC (P = 0.05; OR, 1.95), but not in CD (P = 0.09). 28872970 2017
Entrez Id: 120892
Gene Symbol: LRRK2
LRRK2
0.500 Biomarker disease BEFREE While genome-wide association studies (GWAS) has linked LRRK2 with Crohn's disease and leprosy, it has received the greatest attention due to it being implicated as one of the genetic loci associated with autosomal dominant inheritance in Parkinson's disease (PD). 28117607 2017
Entrez Id: 2050
Gene Symbol: EPHB4
EPHB4
0.110 GeneticVariation disease BEFREE While colocalization analyses were inconclusive, functional characterization of these variants provided the strongest evidence for a model in which genetic variation at rs1734907 modulates risk of schizophrenia and Crohn's disease via altered methylation and expression of EPHB4-a gene whose protein product guides the migration of neuronal axons in the brain and the migration of lymphocytes towards infected cells in the immune system. 31211845 2019
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
1.000 GeneticVariation disease BEFREE While CARD15 variants associated with CD are located within or near the C-terminal leucine-rich repeat domain and cause decreased NF-kappaB activation, BS mutations affect the central nucleotide-binding NACHT domain and result in increased NF-kappaB activation. 15812565 2005
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.400 GeneticVariation disease LHGDN While CD was strongly associated with both NRAMP1 and MAP, NRAMP1 polymorphisms and MAP themselves were not correlated. 17131479 2006
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.400 GeneticVariation disease BEFREE While CD was strongly associated with both NRAMP1 and MAP, NRAMP1 polymorphisms and MAP themselves were not correlated. 17131479 2006
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.100 Biomarker disease BEFREE Whereas wild-type Teff cells upregulated Mdr1 in the ileum, those lacking Mdr1 displayed mucosal dysfunction and induced Crohn's disease-like ileitis following transfer into Rag1<sup>-/-</sup> hosts. 29262351 2017
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.100 Biomarker disease BEFREE Whereas wild-type Teff cells upregulated Mdr1 in the ileum, those lacking Mdr1 displayed mucosal dysfunction and induced Crohn's disease-like ileitis following transfer into Rag1<sup>-/-</sup> hosts. 29262351 2017
Entrez Id: 3371
Gene Symbol: TNC
TNC
0.020 Biomarker disease BEFREE Whereas the expression of meprinbeta and tenascin-C does not overlap in normal colon tissue, inflamed lesions of the mucosa from patients with Crohn's disease exhibited many meprinbeta-positive leukocytes in regions where tenascin-C was strongly induced. 19748582 2010
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
1.000 GeneticVariation disease LHGDN When the CD-associated CARD15 1007fs variant was analyzed, induction of TNFalpha promoter activity was found to be defective. 15800781 2005
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
1.000 GeneticVariation disease BEFREE When compared with Crohn's disease patients without CARD15 mutations, the presence of at least one CARD15 variant in Crohn's disease patients more frequently led to gASCA positivity (66.1% versus 51.5%, p < 0.0001) and ALCA positivity (43.3% versus 34.9%, p = 0.018) and higher gASCA titers (85.7 versus 51.8 ELISA units, p < 0.0001), independent of ileal involvement. 17595233 2007
Entrez Id: 3645
Gene Symbol: INSRR
INSRR
0.020 Biomarker disease BEFREE When adjusted for confounders, a lower incidence rate of disease activity was found among antidepressant users compared with nonusers in both CD (incidence rate ratio [IRR], 0.75; 95% confidence interval [CI], 0.68-0.82) and UC (IRR, 0.90; 95% CI, 0.84-0.95) patients. 30551218 2019
Entrez Id: 27034
Gene Symbol: ACAD8
ACAD8
0.100 Biomarker disease BEFREE When a sufficiently powered cohort is evaluated, familial aggregation in IBD is associated to an earlier disease onset, more EIMs and more severe phenotype in CD. 24016462 2014